THE 7 MASTER PROTOCOLS:
CLINICAL ARCHITECTURE

"Medicine usually waits for a crash. We engineer the system for maximum resilience."

Over 16 years across the ER, hospital medicine, and General Practice, I managed acute failure. In longevity medicine, we build chronic capacity. I have designed seven distinct protocols targeting the primary pillars of human performance: Longevity, Brain Health, Neurolongevity, Energy, Gut Health, Sleep, and Metabolic Optimisation. Yes, there is overlap, that's biology. Choose your primary target, then layer as needed.

01

LONGEVITY: THE FOUNDATION

Genomic stability, cellular resilience, daily non-negotiables

The chassis. Without a stable genomic and metabolic foundation, high-performance interventions fail. This is your biological insurance policy: the supplements everyone should take, regardless of specific goals.

The Stack:

  • +Vitamin D3 (5,000 IU) + K2 (MK-7, 100mcg)
    Controls 5% of your genome. K2 directs calcium to bones, not arteries.
  • +GlyNAC Complex (Glycine 2g + NAC 1.2g)
    Restores glutathione, the master antioxidant. Research suggests it may help improve markers associated with ageing.
  • +Methylated B-Complex
    Supports methylation pathways critical for DNA repair and neurotransmitter synthesis.
  • +Omega-3 (EPA/DHA 2-3g daily)
    Membrane fluidity, anti-inflammatory, cardiovascular protection.
02

BRAIN FOG / CLARITY

Acute cognitive enhancement, focus, processing speed

The structural and software upgrade. This stack targets neurotransmitter synthesis, repairs synaptic density, and eliminates metabolic bottlenecks. For when you need to think sharper today, while rebuilding the physical pathways for tomorrow.

The Stack:

  • +Creatine Monohydrate (5g)
    Brain ATP buffer. Proven to improve working memory and reduce mental fatigue.
  • +CDP-Choline / Citicoline (250-500mg)
    Acetylcholine synthesis for memory and learning. Crosses blood-brain barrier.
  • +Magnesium L-Threonate (2g)
    The only form proven to cross the blood-brain barrier. Addresses structural brain fog by supporting physical synaptic density.
  • +Methylated B-Complex (with 5-MTHF)
    Crucial for anyone with MTHFR mutations (~50% of people). Bypasses genetic bottlenecks to synthesize dopamine and serotonin.
  • +Rhodiola Rosea (300-500mg)
    Adaptogen. Raises threshold for stress-induced cognitive decline. Take morning, empty stomach.
  • +L-Theanine (200mg)
    Calm focus. Pairs with caffeine to smooth out jitters while maintaining alertness.
03

NEUROLONGEVITY

Long-term brain preservation, dementia prevention

The structural rebuild. Not for today's meeting, for your brain at 80. This protocol targets brain-derived neurotrophic factor (BDNF), neuroplasticity, and protection against amyloid/tau accumulation.

The Stack:

  • +Magnesium L-Threonate (2g)
    Only form that crosses blood-brain barrier to increase brain magnesium. Boosts BDNF.
  • +High-DHA Omega-3 (2g DHA minimum)
    Brain is 60% fat. DHA is structural component of neurons. Anti-inflammatory.
  • +Lions Mane Mushroom (1g)
    Stimulates nerve growth factor (NGF). Promotes neurogenesis and myelin repair.
  • +Curcumin (500mg, 2x daily with black pepper)
    Crosses blood-brain barrier. Reduces amyloid plaque formation. Potent anti-inflammatory.
Note: This protocol overlaps with Clarity (both use Creatine, Omega-3). The distinction: Clarity = acute performance. Neurolongevity = structural preservation over decades.
04

ENERGY / VITALITY

Mitochondrial ATP synthesis, electron transport chain optimisation

The engine block. This stack targets the root of cellular energy production. Your mitochondria. For when you're done with caffeine band-aids and ready to fix the power plant.

The Stack:

  • +CoQ10 (Ubiquinol 200mg)
    Electron carrier in the mitochondrial membrane. Must be Ubiquinol (active form) if over 40.
  • +Acetyl-L-Carnitine (1g)
    Shuttles fatty acids into mitochondria for beta-oxidation. Acetyl form crosses blood-brain barrier.
  • +PQQ (20mg)
    Triggers mitochondrial biogenesis. Builds NEW power plants. Use BioPQQ® (natural fermentation).
  • +Alpha-Lipoic Acid (R-ALA 300-600mg)
    Universal antioxidant. Recycles vitamins C & E. Improves glucose uptake. Must be R-ALA (active form).
05

GUT HEALTH: THE BARRIER

Intestinal barrier repair, systemic inflammation control

The firewall. Your gut lining is ONE CELL THICK. When it breaks, bacterial toxins flood your bloodstream, triggering anxiety, joint pain, brain fog, and chronic fatigue. This protocol seals the barrier and extinguishes systemic inflammation.

⚠️ Critical: Supplements alone will NOT fix a broken gut if you're still eating inflammatory foods, taking NSAIDs daily, or living in chronic stress. Diet and lifestyle are non-negotiable foundations. These supplements accelerate repair. They don't replace discipline.

The Stack:

  • +L-Glutamine (5g, 2x daily)
    Primary fuel for intestinal cells. Repairs tight junctions. Clinical trials show reduced permeability.
  • +Zinc Carnosine (75mg daily)
    Directly heals gut lining. Used in Japan for gastric ulcers for decades.
  • +Collagen Peptides (10-20g daily)
    Provides glycine and proline, building blocks for tissue repair.
  • +Curcumin (500mg, 2x daily with black pepper)
    NF-κB inhibitor. Blocks the master switch of inflammation.
  • +Omega-3 (EPA/DHA 2-3g daily)
    Competes with inflammatory omega-6. Reduces IL-6 and TNF-alpha cytokine production.
  • +Spore-Based Probiotics (Bacillus subtilis, B. coagulans)
    Survive stomach acid. Recolonize gut. Produce anti-inflammatory compounds.
Timeline: 8-12 weeks for barrier repair. 3-6 months for full symptom resolution of systemic inflammation.
06

SLEEP & RECOVERY

Glymphatic activation, deep sleep architecture, waste clearance

The dishwasher. Your brain accumulates metabolic waste (amyloid beta, tau proteins) all day. The glymphatic system ONLY activates during deep Non-REM sleep to flush this sewage. Poor sleep = toxic brain = brain fog. This protocol optimises sleep architecture for maximum waste clearance.

The Stack:

  • +Magnesium Bisglycinate (400mg elemental)
    Activates GABA receptors (brain's brake pedal). Superior absorption vs. oxide/citrate. Take 30-60 min before bed.
  • +Glycine (3g powder)
    Lowers core body temperature by dilating extremity blood vessels, critical signal for deep sleep onset.
  • +Apigenin (50mg)
    Flavonoid from chamomile. Binds to benzodiazepine receptors without addiction risk.
  • +L-Theanine (200mg)
    Crosses blood-brain barrier. Increases alpha waves. Calms without sedation.
Mechanical Hack: Sleep on your side (lateral decubitus position). Research shows glymphatic flow is 2x more efficient on your side vs. back/stomach. Gravity matters.
07

METABOLIC HEALTH

Insulin sensitivity, glucose disposal, mitochondrial efficiency

The overflow prevention system. Insulin resistance is the root of accelerated ageing, hyperinsulinemia damages everything from your brain to your arteries. This protocol targets AMPK activation, insulin signaling, and cellular glucose uptake. Critical if you have pre-diabetes, metabolic syndrome, or a family history of Type 2 diabetes.

The Stack:

  • +Berberine (500mg, 2-3x daily with meals)
    AMPK activator. Some studies suggest comparable effects to Metformin for glucose control. Take with food.
  • +Alpha-Lipoic Acid (R-ALA 300-600mg)
    Improves insulin-mediated glucose uptake. Recycles antioxidants. Must be R-ALA (active isomer).
  • +Chromium Picolinate (200-400mcg)
    Enhances insulin receptor signaling. Reduces cravings. Picolinate form has best absorption.
  • +Myo-Inositol (2g daily)
    Second messenger for insulin signaling. Proven effective in PCOS and metabolic syndrome.
  • +Cinnamon Extract (500mg Ceylon cinnamon)
    Improves insulin sensitivity. Must be Ceylon (not Cassia, high coumarin content).
Note: This protocol has significant overlap with Energy/Vitality (ALA appears in both). The distinction: Metabolic Health targets glucose/insulin pathways. Energy targets ATP production. If you have insulin resistance, prioritize this stack.

CLINICAL IMPLEMENTATION

Timing & Dosage Matters

⚠️WHY MOST SUPPLEMENTS FAIL

1. Wrong Forms

Magnesium Oxide = 4% absorption. CoQ10 as Ubiquinone is useless over 40. Methylated B vitamins matter if you have MTHFR mutations. Form > > > Dose.

2. Proprietary Blends

If a label says "Mitochondrial Blend 500mg" but doesn't list exact milligrams of each ingredient, it's a scam. Demand transparency.

3. Bad Timing

Fat-soluble vitamins (D, K, CoQ10) need dietary fat. Magnesium before bed. Rhodiola on empty stomach. Timing matters.

Frequently Asked Questions

Clinical Clarity

What is a longevity protocol?

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Which protocol should I start with?

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Can I combine multiple protocols?

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How long before I see results from a longevity protocol?

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Are these protocols safe to take long-term?

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